PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s1020.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 537aa    MW: 59388.2 Da    PI: 7.4109
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s1020.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.47.7e-24203256155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          k r++W+ eLH++F++av+q+ G +k  Pk+il+ m+v++Lt+++v+SHLQkYRl
  Kaladp0011s1020.1.p 203 KSRVVWSMELHQKFLDAVNQI-GYDKLGPKKILDKMNVPSLTRDNVASHLQKYRL 256
                          68*******************.********************************8 PP
2Myb_DNA-binding35.81.8e-11205255148
                          TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                          r  W+ e++++++dav+q G +   +k+I  +m+   +t+ ++ s++qky+
  Kaladp0011s1020.1.p 205 RVVWSMELHQKFLDAVNQIGYDklGPKKILDKMNvPSLTRDNVASHLQKYR 255
                          678***********************************************7 PP
3Response_reg81.62.5e-27191271109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl+vdD+p+ +++l+++l+k  y +v+++  + +al++l+e++  +D+++ D++mp+mdG++ll+++  e  +lp+i+++  ge + + +
  Kaladp0011s1020.1.p  19 VLVVDDDPTWLKILEKMLKKCSY-QVTTCGLAVDALAMLRENRnsFDIVISDVNMPDMDGFKLLEQLGLEM-DLPVIMMSVDGETSRVMK 106
                          89*********************.***************999999**********************6654.8***************** PP

                          HHHTTESEEEESS--HHHHHH CS
         Response_reg  89 alkaGakdflsKpfdpeelvk 109
                           ++ Ga d+l Kp+ ++el +
  Kaladp0011s1020.1.p 107 GVRHGACDYLLKPIRMKELSN 127
                          ****************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MESGFSSPRA DKFPAGLRVL VVDDDPTWLK ILEKMLKKCS YQVTTCGLAV DALAMLRENR  60
NSFDIVISDV NMPDMDGFKL LEQLGLEMDL PVIMMSVDGE TSRVMKGVRH GACDYLLKPI  120
RMKELSNIWQ HVYRKKMHEV KDMADSNSKP VGSLHMMKNE TDDFDGQLHP GNGVSSGGVK  180
KRKDSERKRH GNPDLVDPSS SKKSRVVWSM ELHQKFLDAV NQIGYDKLGP KKILDKMNVP  240
SLTRDNVASH LQKYRLYLAK VQNDNDQKTS SGGTKHQAFS PGDSAGSFDF GSVFSLDQKN  300
TAGAAQFGYS ANRLLVDELG MGFLEGDTEG TMVSFSPAGR PATPWKSDLP DPRKASSPRI  360
QPVQAFSSLD RSYKYQQFEF EPAAHQWNKG PAPAPMMQFA QANQQMMTSC HNAGNTFWSR  420
SNLMAAQPLQ DTFHSAYNNI SSDHPWPLMA PYRSQAPPPL MPDAKLPNLT QNYNAAKSSF  480
HQADLKFSAA AFSSNDNGSV VESRPFQGLG GSGMNKNSDC FIPELMDELG SAICFE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-110ARR-B family protein