PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0011s0962.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 217aa MW: 24002.2 Da PI: 9.0235 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.6 | 1.6e-19 | 8 | 53 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W+++Ed lv++v+q+G+++W+ I++ ++ gRt+k+c++rw + Kaladp0011s0962.1.p 8 RGSWSPQEDATLVKLVQQHGPRNWSMISAGIP-GRTGKSCRLRWCNQ 53 89******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 54.6 | 2.5e-17 | 62 | 104 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ed+++ +a++ +G++ W+tIar+++ gRt++ +k++w++ Kaladp0011s0962.1.p 62 PFSPSEDDIITRAHATHGNR-WATIARMLP-GRTDNAIKNHWNST 104 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 217 aa Download sequence |
MAESEAVRGS WSPQEDATLV KLVQQHGPRN WSMISAGIPG RTGKSCRLRW CNQLSPSVHH 60 RPFSPSEDDI ITRAHATHGN RWATIARMLP GRTDNAIKNH WNSTLKRRRK RMRRTSSVSS 120 HPPQLNISSD RGGPDDGDSE AALLETDLTL SPPGECLPPP DEKKGLAVAE EETCLMKLMQ 180 KMIAAEVRNY IDQLRAQGGL GTLLLHSAVL DHHHHL* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 106 | 114 | KRRRKRMRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37260.1 | 2e-49 | MYB family protein |