PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0957.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 513aa MW: 57390.6 Da PI: 7.7714

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0957.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.9	3.1e-06	163	206	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 +C++++ +++ l C + ++ lC++C ++H H++++ Kaladp0011s0957.1.p 163 LVCQRCHAQPAALQCIEERVSLCQSCDWTGHDAstsgaaHKRRN 206 68*****************************5477888888765 PP
2	CCT	57.7	4.3e-20	455	498	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a+lRYkeK+k RkFeK++rY sRK++A+ R+RvKGrFvk+ Kaladp0011s0957.1.p 455 RSKAVLRYKEKKKMRKFEKTVRYVSRKERADIRKRVKGRFVKAG 498 889**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MSHHFFFLHS SFIFISISIR ARCLFLALFL SRFSFLSRAF VFTSAKSDPN PFTPQRGVER 60 FFRKAPPFSA RRASTSYITL SEAKDARKLP YLPFCQTRIA FIFFKKCSSG RDSVISIMGY 120 KCDFCCNRSS VVYCRSDDAC LCLDCDTSVH AANSLSRRHS RTLVCQRCHA QPAALQCIEE 180 RVSLCQSCDW TGHDASTSGA AHKRRNIKFY SDCPSAAELQ SMWSYDSESV SVSGSISIGE 240 HEMGLMSIAD GNVKQAKPST TEVDQLCNVN PDQVWNSSAQ DLDSSFSNAS HETEIVNTPQ 300 PKLSFLEAIN PTGDDDLFVD FDMDESELNL ENYEELFRVN FSQSEELLEN GGIDSLFEPR 360 NKSLTELNCH RTLASQKVAS AAQPGCSKAL SVDSMMTSKT EPVIHFKQRQ SSSTLSFSGD 420 GGGDFIDCGT SSMISLGEHP WCPSFQESPS PSTNRSKAVL RYKEKKKMRK FEKTVRYVSR 480 KERADIRKRV KGRFVKAGET YDYDPLSQTK SC*

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MSHHFFFLHS SFIFISISIR ARCLFLALFL SRFSFLSRAF VFTSAKSDPN PFTPQRGVER  60
FFRKAPPFSA RRASTSYITL SEAKDARKLP YLPFCQTRIA FIFFKKCSSG RDSVISIMGY  120
KCDFCCNRSS VVYCRSDDAC LCLDCDTSVH AANSLSRRHS RTLVCQRCHA QPAALQCIEE  180
RVSLCQSCDW TGHDASTSGA AHKRRNIKFY SDCPSAAELQ SMWSYDSESV SVSGSISIGE  240
HEMGLMSIAD GNVKQAKPST TEVDQLCNVN PDQVWNSSAQ DLDSSFSNAS HETEIVNTPQ  300
PKLSFLEAIN PTGDDDLFVD FDMDESELNL ENYEELFRVN FSQSEELLEN GGIDSLFEPR  360
NKSLTELNCH RTLASQKVAS AAQPGCSKAL SVDSMMTSKT EPVIHFKQRQ SSSTLSFSGD  420
GGGDFIDCGT SSMISLGEHP WCPSFQESPS PSTNRSKAVL RYKEKKKMRK FEKTVRYVSR  480
KERADIRKRV KGRFVKAGET YDYDPLSQTK SC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	2e-80	CO-like family protein