PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0746.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 374aa    MW: 42471.8 Da    PI: 8.0997
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0746.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.45.2e-16122167147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          rg W + Ed +l+++v q+G+ +W++ a++++ gR++k+c++rw++ 
  Kaladp0011s0746.1.p 122 RGHWRPAEDAKLKKLVDQFGSQNWNLMAEHFP-GRSGKSCRLRWFNQ 167
                          899*****************************.***********996 PP
2Myb_DNA-binding50.25.9e-16175217246
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                           +++ eE+e+l++ ++++G++ W+ I+++++ gRt++ +k++w+ 
  Kaladp0011s0746.1.p 175 TPFSDEEEEKLLKSHTLYGNK-WAMISKMFP-GRTDNAVKNHWHV 217
                          68*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MKSQDLKNNA ANGYDSFPRL APPPPPLSLF GDIERREWMG LNMRRKSSSA FDLNQTSGRD  60
EEQNNFKSKF DLNERFYSEG RSDERRDQAV KIIKEVVDRD CHHVEVANDE RNENIQKICR  120
SRGHWRPAED AKLKKLVDQF GSQNWNLMAE HFPGRSGKSC RLRWFNQLDP KINKTPFSDE  180
EEEKLLKSHT LYGNKWAMIS KMFPGRTDNA VKNHWHVIMA RKQREQNNNK CVYKKLKPNP  240
ISPASNQTAA VASKEFVACR DESTVTTVSA TNTCLELMLT PTSVRASPCL FAKLPMGSNE  300
GSIHNIIDLN KQLSNFSGES DADSERTDLD SITCIKLNQK KLEVLGDVKD TGANEPEAIC  360
TYADDVRVCL KEN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17800.16e-61MYB family protein