PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s0718.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 370aa MW: 40984.8 Da PI: 6.6407 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.8 | 3.3e-15 | 56 | 103 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l+++ + G g+W+ +ar g+ R++k+c++rw +yl Kaladp0011s0718.1.p 56 KGLWSPEEDDKLINYMLRNGQGCWSDVARSAGLQRCGKSCRLRWINYL 103 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.6 | 5.1e-17 | 109 | 152 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+v+++ +lG++ W+ Ia++++ gRt++++k++w++ Kaladp0011s0718.1.p 109 RGAFSPQEEELIVQLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 152 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 370 aa Download sequence |
MIFGIHALIP IIRSNSSAAM RKPAADSPFT PPPSSSSSPP PSSSSSMKSG NGKLRKGLWS 60 PEEDDKLINY MLRNGQGCWS DVARSAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEELI 120 VQLHSLLGNR WSQIAARLPG RTDNEIKNFW NSTIKKRLKN ATSHNNMPPS ASDDDHQFSN 180 LGSSTGFMCM QRNHQHHLIH QSSNNTMFMN TAATGSYVDH SSSSGSSSSP SMALNHINSN 240 PNSLLMSCDM IFDDQSLVDI YDFGEGLVEL YVPPLDTINI DSTNTNMMSS FNNNDNILVE 300 GFKQVDQRHI MEAAARPNCR YTCGSSGVQE KQLSCEFGET NIRLGEWDLD ELMRSSSEIA 360 YSLPHLDLQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 2e-67 | MYB family protein |