PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0708.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 367aa MW: 41336.1 Da PI: 7.1968

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0708.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00028	207	226	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C k+F+r n++ H+ Kaladp0011s0708.1.p 207 FSCHLCFKTFNRYNNMQMHM 226 89*****************9 PP
2	zf-C2H2	14.5	0.00011	291	313	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ Kaladp0011s0708.1.p 291 FMCRKCGKAFAVRGDWRTHEKNC 313 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MMNDNHPYYS NQFNNGFFYS SAPASSSSSQ SFTNPTIPAY INNNFYLSYF NNNLKNCYNF 60 NNSNSFTPHH CNQLPTPPPS PPLRQALPLL SLSPTRHKNI EQKQHHEADQ EMDHQQVMVE 120 DGDEVEDDGC LLSIDLQLGL PDICASSSAD LLNISSSISS SVDEGGVIIA DSSNCSGYES 180 TTPTTRLNKG QYWIPTPAQI LIGPTQFSCH LCFKTFNRYN NMQMHMWGHG SQYRRGPESL 240 RGTQPTAMLR LPCYCCSPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGMKP FMCRKCGKAF 300 AVRGDWRTHE KNCGKLWYCT CGSDFKHKRS LKDHIKAFGN GHAAYGIDCF DQEDDEAALS 360 DIEQDS*

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MMNDNHPYYS NQFNNGFFYS SAPASSSSSQ SFTNPTIPAY INNNFYLSYF NNNLKNCYNF  60
NNSNSFTPHH CNQLPTPPPS PPLRQALPLL SLSPTRHKNI EQKQHHEADQ EMDHQQVMVE  120
DGDEVEDDGC LLSIDLQLGL PDICASSSAD LLNISSSISS SVDEGGVIIA DSSNCSGYES  180
TTPTTRLNKG QYWIPTPAQI LIGPTQFSCH LCFKTFNRYN NMQMHMWGHG SQYRRGPESL  240
RGTQPTAMLR LPCYCCSPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGMKP FMCRKCGKAF  300
AVRGDWRTHE KNCGKLWYCT CGSDFKHKRS LKDHIKAFGN GHAAYGIDCF DQEDDEAALS  360
DIEQDS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-123	C2H2 family protein