PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s0356.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 325aa MW: 36337.1 Da PI: 10.8445 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 56 | 1.1e-17 | 73 | 162 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +Wt++ +++Li+a + +l+rg+l++++W+ev++++ ++++ +r+ +qCk++++ l+k+yk +k +++ +s + s +p+f++l Kaladp0011s0356.1.p 73 CWTEEATRTLIDAWGTRYLDLNRGNLRQKHWQEVADAVnarhgAAKKTRRTDVQCKNRIDTLKKKYKIEKSRASAAASYA-SPWPFFHRL 161 8**************************************99999999***************************986555.59******9 PP trihelix 86 e 86 + Kaladp0011s0356.1.p 162 D 162 8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MTSSAFPHVF PATPQNLNLS RKLSRRPKHD RRQQKSSLKD TPMDDPPPPP QQHTLALVPH 60 RAPHGPVPFR EDCWTEEATR TLIDAWGTRY LDLNRGNLRQ KHWQEVADAV NARHGAAKKT 120 RRTDVQCKNR IDTLKKKYKI EKSRASAAAS YASPWPFFHR LDSLIGPIPS NKSSLSSLPA 180 HRRSGFSAPV PVAPRSASVK RPAFDDSSFR RNFFSTFAAA AAAATAEDSD ATRKSRSSSA 240 GRLGGAVGDT GGCKELAQAI ATFGEIYERV EGSKQRQVIE LEMKRMQFAK ELEIQRMEML 300 VDMQLQFEKS KRQKRQSNGA DNYL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 3e-45 | Trihelix family protein |