PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0227.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 344aa MW: 37959.3 Da PI: 7.3805

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0227.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.3	3.2e-08	69	114	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvpl 42 + C+ +e ++ C+ + lC+ C + +H + H++vp+ Kaladp0011s0227.1.p 69 VPACDVCEGAPAAVTCKADAASLCAVCDQDIH-SvnplarrHERVPI 114 688*****************************.44888888999987 PP
2	CCT	68.3	2.1e-23	288	330	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea++lRYkeKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k+ Kaladp0011s0227.1.p 288 REARVLRYKEKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKR 330 9****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MRMAEEEEES YVHGVPVSWP IVPPRAASKL CHSCNSAAAK LFCRRHSAFF CLNCDAKIHL 60 FTSASHHRVP ACDVCEGAPA AVTCKADAAS LCAVCDQDIH SVNPLARRHE RVPIAPLQVH 120 HPAPNKSAPP APIVICGFDV SDFLVPMAEE EILWMNLNQN SKLALCPSEV KSEDVIFPDF 180 DPLDDVDLPD PVSYGDFKHE TIISYSDSVV PTDHCYISTS SPIANFETLI PKLLLMHVQP 240 PAKSTHSPIH LTVVSDHHSS LTTSVGGGGD FAKNVPVPAT RQISATEREA RVLRYKEKRK 300 NRKFEKTIRY ASRKAYAETR PRIKGRFAKR RGDSDVFSDL LTF*

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MRMAEEEEES YVHGVPVSWP IVPPRAASKL CHSCNSAAAK LFCRRHSAFF CLNCDAKIHL  60
FTSASHHRVP ACDVCEGAPA AVTCKADAAS LCAVCDQDIH SVNPLARRHE RVPIAPLQVH  120
HPAPNKSAPP APIVICGFDV SDFLVPMAEE EILWMNLNQN SKLALCPSEV KSEDVIFPDF  180
DPLDDVDLPD PVSYGDFKHE TIISYSDSVV PTDHCYISTS SPIANFETLI PKLLLMHVQP  240
PAKSTHSPIH LTVVSDHHSS LTTSVGGGGD FAKNVPVPAT RQISATEREA RVLRYKEKRK  300
NRKFEKTIRY ASRKAYAETR PRIKGRFAKR RGDSDVFSDL LTF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24790.1	2e-62	CO-like family protein