PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s0226.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 323aa MW: 36117.6 Da PI: 7.8073 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43 | 1.1e-13 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd l+ ++ +G+g +W + ++++g++R++k+c++rw++yl Kaladp0011s0226.2.p 14 KGPWAPEEDAMLKAYIDAHGTGgNWIALPQKIGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 35.4 | 2.5e-11 | 70 | 111 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++ eEd + + G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0011s0226.2.p 70 GFSDEEDNVICSLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 699*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MGRAPCCDKT LVKKGPWAPE EDAMLKAYID AHGTGGNWIA LPQKIGLRRC GKSCRLRWLN 60 YLRPNIKHGG FSDEEDNVIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TKLKKKLLGR 120 RKQCNNIVSS SSSSTMEDTK DGMSDETQRL SNSALERLQL HIQLQNRPRT LNSVNGPTAH 180 WPKLLHPAQE RMIRSLTESQ NDINTPHQHK LDKLDECIGS SGSQIESMRQ GLEQLTSTPS 240 SLSGLQLQAE FENYMKSNSE IIAGKGDEER KELDGSFWWS GEMENKSSAS ISSNSWDDSY 300 SVINSAGGNL MMFHDYGLGY NM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 5e-90 | MYB family protein |