PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0189.6.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 295aa    MW: 31826.3 Da    PI: 5.7245
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0189.6.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.9e-12236281555
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  Kaladp0011s0189.6.p 236 HSIAERLRRERIAERMKGLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 281
                          99***********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MQPQPQCNGS SASPVDDMQH NLNLNSSTAA SPLMKFPLLP SSHHDLQTSS HHFDQMQQSF  60
DHAPPAPDDF LEQMLSTLNS ASAWDLKAAG ESSGSPEESD NGVSASAFQF DEAVAASRLR  120
AQQHHQHMLP LPFGVDNLVD RSRGSLLEGS SFDSYHPGVE NQMAGLFNGS FVGSLLGPGQ  180
QMNLPEQFQS SQQGGPSFEA PAAMNNQAPI SSSGGAAAAP PKQRVRARRG QATDPHSIAE  240
RLRRERIAER MKGLQELVPN ANKTDKASML DEIIDYVKFL QLQVKVSSWL TLSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241246RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.13e-25bHLH family protein