PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0178.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 697aa    MW: 75086.5 Da    PI: 5.7522
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0178.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like85.26.9e-27209262155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          +pr++W+++LH++Fv+av+qL G++kA+Pk+il++m+ ++Lt+e+v+SHLQkYR+
  Kaladp0011s0178.1.p 209 RPRVVWNSDLHRKFVSAVNQL-GIDKAVPKKILDIMDDESLTRENVASHLQKYRM 262
                          59*******************.********************************8 PP
2Myb_DNA-binding31.34.7e-10211261148
                          TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                          r  W  +++ ++v av+qlG +   +k+I   m  + +t++++ s++qky+
  Kaladp0011s0178.1.p 211 RVVWNSDLHRKFVSAVNQLGIDkaVPKKILDIMDdESLTRENVASHLQKYR 261
                          678***********************************************7 PP
3Response_reg79.79.6e-27211291109
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl+vdD+++ +  l+++l++ ++ +v+++  ++ea+ell++++  +D+++ D++mp++dG++ll++i  e  +lp+i+++++++++++++
  Kaladp0011s0178.1.p  21 VLCVDDDQTCLLWLENLLTSCQF-NVTTTLYAREAIELLRQNKtmYDIVISDVQMPDIDGFQLLETIGLEM-DLPVIMMSMFNNQDYVTR 108
                          89*********************.***************99999***********************6654.8***************** PP

                          HHHTTESEEEESS--HHHHHH CS
         Response_reg  89 alkaGakdflsKpfdpeelvk 109
                           +  Ga d+l+Kp+  ee+ +
  Kaladp0011s0178.1.p 109 GVVHGAVDYLVKPVRLEEIQN 129
                          *****************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    
MAAMGQQAEE IDDKFPVGIR VLCVDDDQTC LLWLENLLTS CQFNVTTTLY AREAIELLRQ  60
NKTMYDIVIS DVQMPDIDGF QLLETIGLEM DLPVIMMSMF NNQDYVTRGV VHGAVDYLVK  120
PVRLEEIQNI WQHVLRKRKG VGNGKKLATL ENKSSQGAAA NGAVADSAAS AGEASNKRRR  180
APSDKEDEDY EEEEEDSGRE NEEQTSHKRP RVVWNSDLHR KFVSAVNQLG IDKAVPKKIL  240
DIMDDESLTR ENVASHLQKY RMYLKKISNG NPQQGVFGAL GGRHALDAMG YRGGRLPNSL  300
LSGYPPSLSG ILGARVSPGS GVNFRSISAS DLIQSGQSLR NSINPLAKLQ PSVMPSLQNG  360
SLFQGMMPGG FEQDPSQGGK ALAQLGSYSP GLGASGFGVS DNFVDPKVMM NGSANSSLML  420
PAPPQFPGSA PVPGQLRIGG VPGASGAGFM DRGGALESWK SAGQHPHNSL TGSRTFTEDH  480
NLPMNNNNAM NGIASTGIHQ QLLGFPQMSG NSNMQGENGI NNVDHMKQQE YNRELDNVFG  540
SLNLIIPPGG GGGIMGSVGM DQSHLGAVAN GGDFIGQQTG ILPADTSFKP NNDSFVPDQA  600
NANLPQDDFM PNGIDSLDDI VTAMIRRVFL KLHSLFIFNA WLLIAELGAR RRTTDHRRCS  660
WIPSSTSTPK ASESRGEPLA FGVCFFNHNA SAGVVM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.14e-81ARR-B family protein