PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0010s0165.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | LBD | ||||||||
Protein Properties | Length: 191aa MW: 20580.2 Da PI: 6.1 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 130.4 | 7.6e-41 | 15 | 114 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +CaaCk+l+r+C++ C++apyf +++p kfa vhk+FGasnv+k+l+++pee+r++++++lvyeAear++dPvyG++g i +lq++l++l Kaladp0010s0165.1.p 15 SCAACKLLKRRCSPTCIFAPYFRSDDPTKFAKVHKVFGASNVSKILSEVPEEQRQETVNTLVYEAEARLEDPVYGCIGAIAALQRKLAEL 104 6***************************************************************************************** PP DUF260 91 kaelallkee 100 + +la ++++ Kaladp0010s0165.1.p 105 QRDLAIARAR 114 ****999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MRNTSLHHEP RAASSCAACK LLKRRCSPTC IFAPYFRSDD PTKFAKVHKV FGASNVSKIL 60 SEVPEEQRQE TVNTLVYEAE ARLEDPVYGC IGAIAALQRK LAELQRDLAI ARARLAGYGT 120 CLSNASSSSG ATGNWVDQQH LIDSMSCFTQ MNDGLGGDGY NSNACVDIDQ LIASAYGFEV 180 GLSTASFPFE * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11090.1 | 5e-64 | LBD family protein |