PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0010s0090.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 365aa MW: 40872.8 Da PI: 6.8799

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0010s0090.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.4	1.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++q G g+W+t ++ g+ R++k+c++rw +yl Kaladp0010s0090.1.p 14 KGPWTPEEDQKLVDYIQQNGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.8e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ Kaladp0010s0090.1.p 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLVDYIQ QNGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSILT SNLYNNPGSD SHMANISRLL AMHSSSGSIN PELLRIATSL 180 VHDPVGNYYA PAQLDPLDPT RMIPDQVLTQ HHSLSQIQAL QQQMAGYGST GQVHIAESNL 240 SDDHRDIAQD YVPMMPFNGF YNHGSEQSAL TMPAEQSSSA AFRPPNAQNF SMNSVMSTPS 300 SSPTHFKKSH SSSNVYINSS CTSTEDERDN HTTSNSAAAD NCSNLMMMMK FEMPEIFDVS 360 EFIY*

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLVDYIQ QNGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSSILT SNLYNNPGSD SHMANISRLL AMHSSSGSIN PELLRIATSL  180
VHDPVGNYYA PAQLDPLDPT RMIPDQVLTQ HHSLSQIQAL QQQMAGYGST GQVHIAESNL  240
SDDHRDIAQD YVPMMPFNGF YNHGSEQSAL TMPAEQSSSA AFRPPNAQNF SMNSVMSTPS  300
SSPTHFKKSH SSSNVYINSS CTSTEDERDN HTTSNSAAAD NCSNLMMMMK FEMPEIFDVS  360
EFIY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	2e-98	MYB family protein