PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0010s0032.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 273aa    MW: 30377.6 Da    PI: 8.9762
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0010s0032.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.51.1e-1366114355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ++h e+ErrRR+riN  +++Lr+llP++    ++K++Ka+ L ++++ +k+Lq
  Kaladp0010s0032.1.p  66 KNHREAERRRRERINAHLATLRSLLPSN----NRKMDKAALLAEVINGVKDLQ 114
                          58*************************9....9*****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MECRLRGEEL ECAKRFDPFE VEPGGAGDGE EVVADSGDEE MVKCLGKRRK NKKKVAISHI  60
AAVALKNHRE AERRRRERIN AHLATLRSLL PSNNRKMDKA ALLAEVINGV KDLQEHARRV  120
SEGLLMPMDA DELTVEPLSN ESENGAVTFK ASLCCDLRPD LFADLRQAIG SLRLKTLRSE  180
ISTLGERVKT LFILSSHNDV NDTGAQKNLA NAILQALSSV LYKPSPLPEY SLRTTLSQKR  240
FRASFEDYSS PRSVLSHKRF KYSFFESSSS SA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14553LGKRRKNKK
27277ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-29bHLH family protein