PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0009s0045.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 98aa    MW: 10938.4 Da    PI: 9.3627
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0009s0045.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.54.1e-0729642054
                         HHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                  HLH 20 feeLrellPk.askapskKlsKaeiLekAveYIksL 54
                         +++L++llP+ + +++s+K+s   +L+++++YI+ L
  Kaladp0009s0045.1.p 29 MSKLQQLLPElRNRGRSEKVSARKVLQETCNYIRTL 64
                         789*******777*********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MSSRRQSRHQ SSSSESSPRI TGEQILGLMS KLQQLLPELR NRGRSEKVSA RKVLQETCNY  60
IRTLREEVDD LSLRLTELLA TIDADSPEAA VIRSLLS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.12e-32bHLH family protein