PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0500.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 278aa    MW: 31066.6 Da    PI: 4.9564
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0500.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.28.9e-141461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd  l+++ + +G g W  +++  g++R++k+c++rw++yl
  Kaladp0008s0500.1.p 14 KGAWTAEEDRMLAEYMEAYGEGKWPNVPNVTGLKRCGKSCRLRWLNYL 61
                         79********************************************97 PP
2Myb_DNA-binding54.33.1e-1767112148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg+ +++E++l+v+++++lG++ W++Ia +++ gRt++++k++w++yl
  Kaladp0008s0500.1.p  67 RGNISPDEEDLIVRLHNLLGNR-WSLIAGRLP-GRTDNEVKNYWNTYL 112
                          7899******************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGRRPCCAKE GLNKGAWTAE EDRMLAEYME AYGEGKWPNV PNVTGLKRCG KSCRLRWLNY  60
LRPDIKRGNI SPDEEDLIVR LHNLLGNRWS LIAGRLPGRT DNEVKNYWNT YLSKKIGSSN  120
KNNTKKKQQQ PPFHVAQQTS MNHQVLLEEE KSSLVVTASE DQLKNSNYML NTNCSQKVGS  180
GSNEDCLTLE EIIEFAEFGG GKTQQNNIVG ADPGSSSTVQ HDSFCPLGPE SNLAWPGHKD  240
GQWDDWLLDA MAADAEDWLP DCDVRDFLNS VETDSTV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.17e-57MYB family protein