PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0463.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 339aa    MW: 35801.6 Da    PI: 6.1895
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0463.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.79.2e-05214236123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C++Cg  Fs+   L  H+r+H
  Kaladp0008s0463.1.p 214 HQCSICGSAFSSGQALGGHMRRH 236
                          79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MDFEGMMESA EMESYATVEF AAGPSQQIAK RKRTKRRRIV VSSSSSGGGG DDKQGCVLAS  60
SEEEEEEGDR SVYESTVTTA TEEEDMAYCL ILLARGGGDV GLGDVNREES AIKTERKRKK  120
AVGSRKTAET ISAVGVYECK TCDKAFQSFQ ALGGHRASHH KKPKVAATND AIPEEVKLVD  180
QIQMVSSTAQ SAIQLKPPSS SSSLAAAHNS SKVHQCSICG SAFSSGQALG GHMRRHRGAM  240
INYTNHTAAA GGAAVVESSS SDEAAAVVVE RGTSDNHNDF LSSLDLNLPA PGEEDEDHHR  300
RSYHQQFIAG GHVNSNASAT ASAAALVFLT PPLVGCYF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13539KRRRI
2116120RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-31C2H2 family protein