PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0008s0436.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 378aa MW: 41593.2 Da PI: 7.2448

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0008s0436.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.7e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d++++ G+g +W + ++++g++R++k+c++rw++yl Kaladp0008s0436.1.p 14 KGPWSPEEDSKLKDYIEKNGTGgNWIALPQKVGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.5	5.6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd + + + G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0008s0436.1.p 69 GDFSEEEDRVICSLYATIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 689****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDSKLKDYIE KNGTGGNWIA LPQKVGLRRC GKSCRLRWLN 60 YLRPNIKHGD FSEEEDRVIC SLYATIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLAF 120 AAAASSSSTT AAFNAAAAAS SAFHHRSSAA NKPLPPSMYS STSSSSHMTS LYNNYNYTPN 180 PNNPKQPLMV DDNHQQQPLL SATATSSCLE TGVSQQQYYQ PLIMFGGTGS DLQQTSCSSN 240 NSENNGGGIS CGNKQADMGI MSYHNFNNNS SIRSNIIPAG FDEINDSNVF LSHQFDDHHS 300 TIINSSTDDD APPAPALMAD FYLDVVKQQQ QQLSMNMNDL SLINIGGGNQ QVINSKITSQ 360 EKDHQRMMMY YFNTDYC*

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDSKLKDYIE KNGTGGNWIA LPQKVGLRRC GKSCRLRWLN  60
YLRPNIKHGD FSEEEDRVIC SLYATIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLAF  120
AAAASSSSTT AAFNAAAAAS SAFHHRSSAA NKPLPPSMYS STSSSSHMTS LYNNYNYTPN  180
PNNPKQPLMV DDNHQQQPLL SATATSSCLE TGVSQQQYYQ PLIMFGGTGS DLQQTSCSSN  240
NSENNGGGIS CGNKQADMGI MSYHNFNNNS SIRSNIIPAG FDEINDSNVF LSHQFDDHHS  300
TIINSSTDDD APPAPALMAD FYLDVVKQQQ QQLSMNMNDL SLINIGGGNQ QVINSKITSQ  360
EKDHQRMMMY YFNTDYC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	2e-79	MYB family protein