PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0392.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family FAR1
Protein Properties Length: 365aa    MW: 43075.1 Da    PI: 9.0137
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0392.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.41.1e-083386256
                 FAR1  2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtra 56
                          Yn+YA+++ Fs+r++k++++  ++++ t+r+fvCsk+ ++  ek++  +++ +r+
  Kaladp0008s0392.1.p 33 LYNDYAQRIEFSIRRRKQRYHvGDEDSLTMREFVCSKKRNKIAEKES--NRSYSRN 86
                         6************99888776588889***********999888877..3333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MKSIKNQEIK FFEAKTSELI GLVVESDEAA YALYNDYAQR IEFSIRRRKQ RYHVGDEDSL  60
TMREFVCSKK RNKIAEKESN RSYSRNITRS DVRLYGSYWR DGIMKKDYDF FGDLLIHDTT  120
YRTNKYDTIC GPFVGMNHYT NNVMFGCGYI INKRRSETTN KSVSRRFIKL CGLCDFYYTF  180
CDVVSEWRSN KMKFNYSNLN GIPEIVVSNS NLLRHVRDVY TRNMYKIFED RFWDGISCTQ  240
IITLCTLFAE TFLVDCTCKC FTQDDLLCMH SLRVLNFNCV QRIPDAYILK RWRKDVRKGC  300
AESEESLCTN SSSESSFWRV DMVHKFSSLI SYCMYYDNIE IRNSAGSRVV GDRNIKKKHK  360
RKEN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-12FAR1 family protein