PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0008s0391.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 278aa MW: 31126.8 Da PI: 5.4307 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.4 | 4.3e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd l+++ + +G g W+ +++ g++R++k+c++rw++yl Kaladp0008s0391.1.p 14 KGAWTAEEDRMLAEYMEAHGDGKWRNVPNVTGLKRCGKSCRLRWLNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 2.8e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++yl Kaladp0008s0391.1.p 67 RGNISPDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTYL 112 7899******************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MGRRPCCVKE GLNKGAWTAE EDRMLAEYME AHGDGKWRNV PNVTGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEVKNYWNT YLSKKIGSSN 120 KNSTKKKQQQ PPFHVAQQTS MNHQVLLEEE KSPLVVTASE DLLKNSNYML NTNCSQKVGS 180 GSNEDCLTLE EIIEFAEFGG GKTQQNNIVV GADAGSSSTV QHDSFCLLGP ESNLAWPGHK 240 DGQWDDWLLD AMAADAEDWL PDCDVRDFQN SVETDTV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 4e-58 | MYB family protein |