PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0008s0299.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 136aa MW: 14913.5 Da PI: 4.7461 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 180.8 | 1.2e-56 | 22 | 117 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 reqdrflPianvsr+mkk lPanakisk+aketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGf++y epl+vyl+kyr Kaladp0008s0299.1.p 22 REQDRFLPIANVSRLMKKSLPANAKISKEAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMGTLGFDEYDEPLRVYLQKYR 111 89**************************************************************************************** PP NF-YB 92 elegek 97 e+egek Kaladp0008s0299.1.p 112 EIEGEK 117 ****97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 136 aa Download sequence |
MAESDNDSGG NYDGIGHDFL AREQDRFLPI ANVSRLMKKS LPANAKISKE AKETVQECVS 60 EFISFVTGEA SDKCQREKRK TINGDDLLWA MGTLGFDEYD EPLRVYLQKY REIEGEKSAG 120 GKAGERDGNS GGGNR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G14540.1 | 1e-64 | NF-YB family protein |