PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0008s0226.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 251aa MW: 27435.1 Da PI: 6.1481 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 91.2 | 1.1e-28 | 31 | 125 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rWt+qe+l+Li+++r +e+r+rrg+ + +p+W++vs++++++g++r+++qC+++w+nl+++ykkike+e++ ++e++s +++ Kaladp0008s0226.3.p 31 RWTRQEILVLIQGKRVVETRVRRGRasgltfgpgQVEPKWASVSSYCKRHGVNRGAVQCRKRWSNLAGDYKKIKEWESQTKEETESFWVM 120 8**********************97778888888*********************************************99999999999 PP trihelix 82 fdqle 86 ++l+ Kaladp0008s0226.3.p 121 RNDLR 125 99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MALSLAVDGG DADGVAAVAA EETAKAPRLP RWTRQEILVL IQGKRVVETR VRRGRASGLT 60 FGPGQVEPKW ASVSSYCKRH GVNRGAVQCR KRWSNLAGDY KKIKEWESQT KEETESFWVM 120 RNDLRREKKL PGFFDREVYD ILEGDSPATC LALALGPALQ ADADDAEAVF DSGRTTAAAA 180 AQDGLFSDED DGNETPLSKE SPPTRVAAPL PISEKVYQPY SSSAQGHIIF NQLRLLLHIH 240 LCCLAIDILV * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 4e-78 | Trihelix family protein |