PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0226.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 325aa    MW: 35618.8 Da    PI: 5.6235
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0226.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix90.51.8e-2831125186
             trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                          rWt+qe+l+Li+++r +e+r+rrg+         + +p+W++vs++++++g++r+++qC+++w+nl+++ykkike+e++ ++e++s +++
  Kaladp0008s0226.1.p  31 RWTRQEILVLIQGKRVVETRVRRGRasgltfgpgQVEPKWASVSSYCKRHGVNRGAVQCRKRWSNLAGDYKKIKEWESQTKEETESFWVM 120
                          8**********************97778888888*********************************************99999999999 PP

             trihelix  82 fdqle 86 
                           ++l+
  Kaladp0008s0226.1.p 121 RNDLR 125
                          99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MALSLAVDGG DADGVAAVAA EETAKAPRLP RWTRQEILVL IQGKRVVETR VRRGRASGLT  60
FGPGQVEPKW ASVSSYCKRH GVNRGAVQCR KRWSNLAGDY KKIKEWESQT KEETESFWVM  120
RNDLRREKKL PGFFDREVYD ILEGDSPATC LALALGPALQ ADADDAEAVF DSGRTTAAAA  180
AQDGLFSDED DGNETPLSKE SPPTRVAAPL PISEKVYQPY SSSAQADARN EKEPAGHQEG  240
GSSSQDARKR RRYTVEDGDV EPTLSLQDKL IRVLERNGEM LRSQLQAQNN NLQLDREQRK  300
DNAASVVGVL NKLADALVKI AEKL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1248252RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-101Trihelix family protein