PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0008s0200.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 524aa MW: 58473.8 Da PI: 6.3739

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0008s0200.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21	8.8e-07	274	295	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H Kaladp0008s0200.4.p 274 FCTICGKGFKRDANLRMHMRGH 295 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MERKDRIHTE NWMRSGVLEN QFSRKSSPDC QYFSIPNQHS DQVEWKNSPF MDYEMRTHES 60 ASGSITNSNH TSSTLGDRNR LPKIPDNMNA QSNPVLQAGA NANWDPNAML NNLSFLEVKI 120 HQLQDMVHLI VGCKCQVANG LDEVTAQQQQ LISADLTSII VQLISTAGSL LPSVTQNILA 180 ANPAIGQLDG ILFPSENGMR SNILPPCNGG AQLDELSKQS DALVKNQVTE QNSLVDEHEM 240 KDEEDVEEGE HLPPGSYEIL QLEKDEILAP HTHFCTICGK GFKRDANLRM HMRGHGDEYK 300 SPAALAKPNK ECTLEPVLIK RYSCPYFGCK RNKDHRKFQP LKTILCVKNH YKRSHCDKSF 360 TCSRCNTKKF SVIADLKTHE KHCGRDKWLC SCGTTFSRKD KLFGHIALFQ GHTPAIPLDD 420 KILAGTDQGE SSKLTSKVSG IQFNFSTNAP ISCGTSNQNM MDFKANLDDP VPCFSPVSFD 480 PCNLLAFNEF PRTTFEDSDT SFSFLIPGSF DYDQKSEGDS ELK*

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MERKDRIHTE NWMRSGVLEN QFSRKSSPDC QYFSIPNQHS DQVEWKNSPF MDYEMRTHES  60
ASGSITNSNH TSSTLGDRNR LPKIPDNMNA QSNPVLQAGA NANWDPNAML NNLSFLEVKI  120
HQLQDMVHLI VGCKCQVANG LDEVTAQQQQ LISADLTSII VQLISTAGSL LPSVTQNILA  180
ANPAIGQLDG ILFPSENGMR SNILPPCNGG AQLDELSKQS DALVKNQVTE QNSLVDEHEM  240
KDEEDVEEGE HLPPGSYEIL QLEKDEILAP HTHFCTICGK GFKRDANLRM HMRGHGDEYK  300
SPAALAKPNK ECTLEPVLIK RYSCPYFGCK RNKDHRKFQP LKTILCVKNH YKRSHCDKSF  360
TCSRCNTKKF SVIADLKTHE KHCGRDKWLC SCGTTFSRKD KLFGHIALFQ GHTPAIPLDD  420
KILAGTDQGE SSKLTSKVSG IQFNFSTNAP ISCGTSNQNM MDFKANLDDP VPCFSPVSFD  480
PCNLLAFNEF PRTTFEDSDT SFSFLIPGSF DYDQKSEGDS ELK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-170	C2H2 family protein