PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0008s0096.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 223aa MW: 25191.8 Da PI: 4.9374 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.5 | 1.5e-20 | 19 | 72 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 kR++f++eq++ Le +F ++++p +++++LA+ lgL rqV +WFqNrRa+ k Kaladp0008s0096.1.p 19 KRRRFSDEQIKSLEIMFGSESKPEPRTKQQLASDLGLHPRQVAIWFQNRRARLK 72 89**************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 116.6 | 1.5e-37 | 19 | 110 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 k+rr+s+eq+k+LE +F +e+k ep+ K++la++Lgl+prqva+WFqnrRAR k+kq+E++y+ Lk+++d+l+++ e L+ke+++L++++ Kaladp0008s0096.1.p 19 KRRRFSDEQIKSLEIMFGSESKPEPRTKQQLASDLGLHPRQVAIWFQNRRARLKSKQIEREYNILKASFDTLASKYECLKKENQALAAQV 108 89**************************************************************************************99 PP HD-ZIP_I/II 92 ke 93 ++ Kaladp0008s0096.1.p 109 QK 110 87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MNLEVGGSKQ EGRSGKNGKR RRFSDEQIKS LEIMFGSESK PEPRTKQQLA SDLGLHPRQV 60 AIWFQNRRAR LKSKQIEREY NILKASFDTL ASKYECLKKE NQALAAQVQK LRDQLGKDEG 120 STAGSALPSK QSWRDEEPET DGYLHESKGK PTYILESYDY ETDNKTLVDT SIANPDWLKD 180 EDDIQNLAEP VGSSLTSSEN SWDSSCFLDQ TGSSSLLWEF WS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 67 | 75 | RRARLKSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 1e-46 | HD-ZIP family protein |