PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0007s0087.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARR-B | ||||||||
Protein Properties | Length: 396aa MW: 44270.8 Da PI: 7.671 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 74.1 | 1.9e-23 | 216 | 268 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 p+l+Wt++LH++F+ a++ L G ekA Pk+i e+m+v gLt+++v SHLQkYR Kaladp0007s0087.1.p 216 PKLVWTTQLHNKFLCALDIL-GLEKAQPKKIHEVMNVAGLTRANVVSHLQKYRH 268 89******************.********************************5 PP | |||||||
2 | Myb_DNA-binding | 35.2 | 2.8e-11 | 217 | 267 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WTt+++ ++++a lG + ++k+I + m+ g+t+ +++s++qky+ Kaladp0007s0087.1.p 217 KLVWTTQLHNKFLCALDILGLEkaQPKKIHEVMNvAGLTRANVVSHLQKYR 267 679***********************************************7 PP | |||||||
3 | Response_reg | 65.5 | 2.5e-22 | 7 | 117 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd...pDlillDiempgmdGlellkeireeepklpiivvtahgeeedal 87 +l+vdD+ + +++ +l+ +y ev+ a++g eal +l ++ +D ++ D+ mp+m+G+el k+i e p++p+ +++a ++ ++l Kaladp0007s0087.1.p 7 ILVVDDDYTCSKVIGGILNAWKY-EVEFAKNGVEALSILYSEKdvtIDGVVADVHMPEMNGFELQKHIIVEFPNIPVFLMSADDKTHTLL 95 89*********************.***************6666688**********************99999***************** PP HHHHTTESEEEESS--HHHHHH CS Response_reg 88 ealkaGakdflsKpfdpeelvk 109 + l+ Ga + Kp++ +el + Kaladp0007s0087.1.p 96 RGLNGGAVLYMHKPVSTAELKN 117 ******************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence |
MLRPLKILVV DDDYTCSKVI GGILNAWKYE VEFAKNGVEA LSILYSEKDV TIDGVVADVH 60 MPEMNGFELQ KHIIVEFPNI PVFLMSADDK THTLLRGLNG GAVLYMHKPV STAELKNIWQ 120 FIYRYSGKAI MNDHTENFSE DVGGSSCGSS TPGDPHFIAV SGAATQLWEG NSNAVEDPLK 180 MYNTRCVQHA DGMQIREAIV NNNAPLPVVP RTGNNPKLVW TTQLHNKFLC ALDILGLEKA 240 QPKKIHEVMN VAGLTRANVV SHLQKYRHFL KRVENQGSRH GECRVIPNRS FTSIMRAGYV 300 PLYYRLKHVD PTDKPRLYRM LQEDLIAMRI PSYSQRYSCP GSTNYLPFKL GSGLMWPKGK 360 HHPMSYNGVE DVTAALDNLQ MGTPFEELPN GASEI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 4e-46 | ARR-B family protein |