PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0007s0081.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 454aa MW: 49442.8 Da PI: 8.9507 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14 | 0.00015 | 190 | 211 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C++Cg+ Fs ++ + H + H Kaladp0007s0081.1.p 190 CHKCGEQFSEWEAVEAHHLSmH 211 *****************98877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence |
MATVWLSLKN SMHCKSGPTD VHDPKSRTHL STILTKKIGR SGCSRSIANL KDAIHGSKRH 60 LDRPPSCSPR SIGSSDFLNP ITHEVILSNS RCELKITSFA GFQDGTNYGG RWCTSGVGGS 120 TFVGTLRPGT PGPGGKTAIS PFYKNSSWAT PLGNLLFCHK QGSGLGGAQL SQHWCSFGAD 180 SNSASSSVAC HKCGEQFSEW EAVEAHHLSM HAGDYPYWSI FFSSNLFSSV CLGLYKIVQI 240 NVRLDLDLHK IKRFLSLTVT ELVEGDSSRK VAEIICRTSC LKAENPCGRI EKVLKVHNMQ 300 KTLARFEEYR EAIKIKANKL PTKHPRCLAD GNELLRFYGT TVSCSLGLYG RSSLCIVDKC 360 CVCRILRNGF SAKKELKCGI GVFTISTSGR AFEIIETLED NGPSIRKANI QDIAGQSGFD 420 SLAGKVGLYS NIEELYLLNP KALLPCFVVI CKS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27240.1 | 3e-94 | C2H2 family protein |