PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0007s0017.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 595aa MW: 66584.2 Da PI: 6.5255

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0007s0017.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.2e-12	424	470	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Kaladp0007s0017.1.p 424 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITELQ 470 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MMKSEVRMGW NEEEKALIAS LLGSRAIDYL LTSLGSGDGG QLMALGSDEN LHSKLSDLVE 60 RPDSSDFSWN YAIFWQLSRS RNGDMVLVWG DGCCREPMDR EELRVGTSCG DRFEDESQQR 120 MRKRVIQNLH AVLGGFEEDD FVLHLDRVTD TEMFFLASMY FSFPLGEGGP GMCFKLGMHL 180 WLPDLPASSR DYCVRSFLAK SAGFQTVVLV PTDMGVVELG SLRSIPESLA WVQSLRSLFS 240 MRSQARFNRP LNENILSGKL EHRDEAEGNT KIFGQDITLG RRSLFREKLT IRKNEDRPWT 300 ACTTPSIIQF PNIQNASTGW ARFCGNKQVN SPGVFTTSAN NNSHELVNGT REDFRFNSYQ 360 PQKEVQIDFS AAPRQPVVNQ PVSAESEHSD VETSCKEAGS SQAVDRRPKK RGRKPANGRE 420 EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG DAITYITELQ AKLKDLESER 480 MKLGTASVTG NTLILESSSV TEVQNRVPNV DIESSQDEVV VKVTCPLEAH PANRIIQAFK 540 EAQMKVVDSK LAVADNTVFH TFVIKSNGRD WLTRERVSAA LARDSSKLEL SSLG*

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MMKSEVRMGW NEEEKALIAS LLGSRAIDYL LTSLGSGDGG QLMALGSDEN LHSKLSDLVE  60
RPDSSDFSWN YAIFWQLSRS RNGDMVLVWG DGCCREPMDR EELRVGTSCG DRFEDESQQR  120
MRKRVIQNLH AVLGGFEEDD FVLHLDRVTD TEMFFLASMY FSFPLGEGGP GMCFKLGMHL  180
WLPDLPASSR DYCVRSFLAK SAGFQTVVLV PTDMGVVELG SLRSIPESLA WVQSLRSLFS  240
MRSQARFNRP LNENILSGKL EHRDEAEGNT KIFGQDITLG RRSLFREKLT IRKNEDRPWT  300
ACTTPSIIQF PNIQNASTGW ARFCGNKQVN SPGVFTTSAN NNSHELVNGT REDFRFNSYQ  360
PQKEVQIDFS AAPRQPVVNQ PVSAESEHSD VETSCKEAGS SQAVDRRPKK RGRKPANGRE  420
EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG DAITYITELQ AKLKDLESER  480
MKLGTASVTG NTLILESSSV TEVQNRVPNV DIESSQDEVV VKVTCPLEAH PANRIIQAFK  540
EAQMKVVDSK LAVADNTVFH TFVIKSNGRD WLTRERVSAA LARDSSKLEL SSLG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	406	414	RRPKKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-174	bHLH family protein