PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0006s0090.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 547aa MW: 58899 Da PI: 8.3033

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0006s0090.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.6	5.7e-41	128	205	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C +dls+ak+yhrrhkvCe+hska+++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ Kaladp0006s0090.1.p 128 TCQVDSCMVDLSDAKDYHRRHKVCEAHSKATQALVGKQMQRFCQQCSRFHVLSEFDEGKRSCRRRLAGHNRRRRKTQP 205 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MARKRDLSYQ QQELMIDQPY HPSGGLQNSR DYWNSKGWNW DCTRFVAQQV NQNAMNLDIP 60 VQSTQNKSNI NGVAVEDDGS LCLKLGSGSG GSSSSDEPQL RPAKRVAASP GGKNSRSPGA 120 GGNGNHPTCQ VDSCMVDLSD AKDYHRRHKV CEAHSKATQA LVGKQMQRFC QQCSRFHVLS 180 EFDEGKRSCR RRLAGHNRRR RKTQPDDATS RLLSAGGQEN AVNTGLDLVG LLAALARAQG 240 NQDNANCAPA IVPNNEQLIQ LISKINSFPP PTNATTKLPV SDNLEITIRE ASSEHQSGSS 300 PNSSSQSTLN LLGVLPHASP VSVPDVSAMP SQRSSRSSDS EKTKSADTYQ PGPLVLRKRT 360 TLDLSSFGGE RSSNSCHYPV EDSNSQDTQA NLPLQLFFSS PEDNNSPPKM ANSSKYFSSD 420 SSNQNEDRSP SSSPGVQLFP VKPSKQRVNH DRITDVVNAT TQVGRTPGGT VSFDLFGGSN 480 KGVEVDFFRG SPNQAGYASP VSATSPSSST CGAQDLTGRI LFKLFDKDPS HLPVALRSEV 540 CILDAH*

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MARKRDLSYQ QQELMIDQPY HPSGGLQNSR DYWNSKGWNW DCTRFVAQQV NQNAMNLDIP  60
VQSTQNKSNI NGVAVEDDGS LCLKLGSGSG GSSSSDEPQL RPAKRVAASP GGKNSRSPGA  120
GGNGNHPTCQ VDSCMVDLSD AKDYHRRHKV CEAHSKATQA LVGKQMQRFC QQCSRFHVLS  180
EFDEGKRSCR RRLAGHNRRR RKTQPDDATS RLLSAGGQEN AVNTGLDLVG LLAALARAQG  240
NQDNANCAPA IVPNNEQLIQ LISKINSFPP PTNATTKLPV SDNLEITIRE ASSEHQSGSS  300
PNSSSQSTLN LLGVLPHASP VSVPDVSAMP SQRSSRSSDS EKTKSADTYQ PGPLVLRKRT  360
TLDLSSFGGE RSSNSCHYPV EDSNSQDTQA NLPLQLFFSS PEDNNSPPKM ANSSKYFSSD  420
SSNQNEDRSP SSSPGVQLFP VKPSKQRVNH DRITDVVNAT TQVGRTPGGT VSFDLFGGSN  480
KGVEVDFFRG SPNQAGYASP VSATSPSSST CGAQDLTGRI LFKLFDKDPS HLPVALRSEV  540
CILDAH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	4e-83	SBP family protein