PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0004s0025.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | SRS | ||||||||
Protein Properties | Length: 381aa MW: 42414.9 Da PI: 8.544 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 26.1 | 2.5e-08 | 58 | 96 | 5 | 42 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv.kst 42 + +C +CGn a+ C ++ C+ CC C hv k t Kaladp0004s0025.2.p 58 KPKCIQCGNVARSRCPYQSCKSCCSKAQNPCYIHVlKQT 96 568*******************************95444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence |
MATPSPSQSI NSTDTGVSQP AASAASASAS APPSTAPISR LHRVDAPAGP KTLRGLNKPK 60 CIQCGNVARS RCPYQSCKSC CSKAQNPCYI HVLKQTATVP DKAPSAGSPK VDEQSNEPSP 120 SGPSHRVPSY RQLSSQFSQF NNLNLQQSRK PLTRKEAFAI NEWRFAKLKE YRERDIEAEN 180 DAFDRYIQNI RLLEDVLSAE ELYADELIES NLEAVAEESN EVVVSRLKLR LKSNSVKAFN 240 AKDKLRDIVD KGLRQFLKRE LNVGDYDIQD FQNQKRRAKS LRDDRARALN DLLDKMNKAR 300 TMEDLEACME LKSQLFKQLP KKHQMELDPG MTSEGKATYE AIPDQQASIS IPKLVKTVNI 360 DQETLSSIDL HFASLEHIGL * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32730.1 | 7e-70 | SRS family protein |