PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0004s0017.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 263aa    MW: 28806.7 Da    PI: 9.7998
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0004s0017.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.2e-057092123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         y+C+ C+++F++   L  H+++H
  Kaladp0004s0017.1.p 70 YTCSFCTRRFKSAQALGGHMNVH 92
                         9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MVRKSSSNSS SCKYMEKVAM KSSSEAEELS DGDKNKKLKD KLCYRGGGGT SAGVVIEDAD  60
LLASWPPRYY TCSFCTRRFK SAQALGGHMN VHRRARAILR SQSISPIPSP PSSPWLIPNT  120
IITPAHHQPL QGDNHHFILP NPNRPHWPLS IPHHTSNISS HSYLSRLPMI TSITSSCSST  180
CTPKNPLFAA AAYKHVPDSL LFHTGERAKK SCVWAESKFN GGLNSRTHQD DAVMRLSLGT  240
GGLITRRSAA DEDIDLELRL GF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.12e-19C2H2 family protein