PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0003s0134.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 357aa MW: 39775.5 Da PI: 5.0205

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0003s0134.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEd++l+++++ +G g+W++ ++ g+ R++k+c++rw +yl Kaladp0003s0134.1.p 14 RGRWTAEEDQILIKYIQDHGEGSWRSLPKNAGLMRCGKSCRLRWINYL 61 8*********************************************97 PP
2	Myb_DNA-binding	51.6	2.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l++++++ lG++ W++Ia+ ++ gRt++++k+rw+++l Kaladp0003s0134.1.p 67 RGNISPQEEDLIIKLHAALGNR-WSLIASQLP-GRTDNEIKNRWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGRAPCCQKV GLKRGRWTAE EDQILIKYIQ DHGEGSWRSL PKNAGLMRCG KSCRLRWINY 60 LRKDLKRGNI SPQEEDLIIK LHAALGNRWS LIASQLPGRT DNEIKNRWNS HLSRSITSWR 120 RPVNDTLPQQ ILDNLAKLMA KPNPSTKKKG SKKNGPANKE TRDKPVTLED DNNDKPQTPD 180 VHKESLPTNS CSQQSLQSIL SLEDRYEAEE GEMDMDLGPV DDYGGVLSLS DMVTPSDPST 240 MMHQPLSPNE ILSPGALYPE FMNELAGLST GHAEMGSTSS WLPNCSTSTM DNTTQPSLSS 300 PSSPFTIDHL LNISSDWNWE DCVQTPNDQD LIMNHEVGSF DNLSWLWDDG GEFGAV*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGRAPCCQKV GLKRGRWTAE EDQILIKYIQ DHGEGSWRSL PKNAGLMRCG KSCRLRWINY  60
LRKDLKRGNI SPQEEDLIIK LHAALGNRWS LIASQLPGRT DNEIKNRWNS HLSRSITSWR  120
RPVNDTLPQQ ILDNLAKLMA KPNPSTKKKG SKKNGPANKE TRDKPVTLED DNNDKPQTPD  180
VHKESLPTNS CSQQSLQSIL SLEDRYEAEE GEMDMDLGPV DDYGGVLSLS DMVTPSDPST  240
MMHQPLSPNE ILSPGALYPE FMNELAGLST GHAEMGSTSS WLPNCSTSTM DNTTQPSLSS  300
PSSPFTIDHL LNISSDWNWE DCVQTPNDQD LIMNHEVGSF DNLSWLWDDG GEFGAV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	5e-69	MYB family protein