PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0003s0056.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

DBB

Protein Properties

Length: 304aa MW: 33000.7 Da PI: 7.458

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0003s0056.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.3	5.6e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ e++ fC ++ lC +C H+ H+ Kaladp0003s0056.2.p 4 QCDVCSSREASVFCSADEAALCSSCDHRVHHAnklaskHQ 43 7****99****************9964446666676 PP
2	zf-B_box	31.5	3.5e-10	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++++C+ ++ek++ lfC++++ lC+dC +++H+ Ht Kaladp0003s0056.2.p 54 DAPVCDICQEKRAFLFCQQDRAVLCKDCDFSIHSAneHT 92 6799*****************************657775 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MKIQCDVCSS REASVFCSAD EAALCSSCDH RVHHANKLAS KHQRFSLVNP DKNDAPVCDI 60 CQEKRAFLFC QQDRAVLCKD CDFSIHSANE HTQKHSRFLL TGVKLSAYVS SSAAAKTTAS 120 ETSLTVSCDL VPDFKSQPLN KKSNSVSNQT LNPQSLAAER IASPSSSGGG ESVTLRNDVG 180 ISEYLIEMLP GWHVEDFLDS TSALYGFSKG DDSMPTFNNT NFQTSDLSSV PLQNAANWVP 240 QAPQPPKQAS HFAASHLTGN ISFKDATNTK ASRRLADEGF AVPQISPQLT NTSSKRSRPV 300 RYY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	6e-73	DBB family protein