PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0002s0129.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 224aa MW: 25518.1 Da PI: 4.5452

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0002s0129.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.7	1.8e-15	11	58	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W ++Edell+ v ++G g+W++ a+t g+ R++k+c++rw++yl Kaladp0002s0129.1.p 11 KGPWDEDEDELLKASVIEMGEGRWESLAQTSGLLRSGKSCRLRWLNYL 58 79****************************99**********97 PP
2	Myb_DNA-binding	52.3	1.3e-16	65	107	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 gr++ eE+e ++++ +qlG++ W++Iar+++ gRt++++k++w++ Kaladp0002s0129.1.p 65 GRMSVEEEEVIIRLQQQLGNK-WSRIARMLP-GRTDNEIKNYWRT 107 799****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MASNQECNSR KGPWDEDEDE LLKASVIEMG EGRWESLAQT SGLLRSGKSC RLRWLNYLRP 60 NLKQGRMSVE EEEVIIRLQQ QLGNKWSRIA RMLPGRTDNE IKNYWRTRVR RQQWENRKLE 120 SYVDGRLSCE QESSSAGTDE SRSMSVSGHN VDKLSIQNIT DDDTHAQTAA SISDFGIACS 180 PYEAWMLAEL SNYQCDGEED RIEAGYGSWD VSGESLYSLW ESS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01530.1	2e-44	MYB family protein