PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0002s0011.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WOX

Protein Properties

Length: 398aa MW: 43704.9 Da PI: 7.974

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0002s0011.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.9	3e-17	52	112	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ Kaladp0002s0011.1.p 52 KPRWNPKPEQIRILEGIFNSgMVNPPRDEIRKIRTQLqeygQVGDANVFYWFQNRKSRSKH 112 89***************99***********************************995 PP
2	Wus_type_Homeobox	110.6	8.5e-36	51	113	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe +++sG+++P+++ei++i+++L+eyG+++d+NVfyWFQNrk+R+++k Kaladp0002s0011.1.p 51 PKPRWNPKPEQIRILEGIFNSGMVNPPRDEIRKIRTQLQEYGQVGDANVFYWFQNRKSRSKHK 113 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MASSNRHWPS MFKSKPCNPH QQWPHEFSSS LLTGCHINPY TSGIEERSPE PKPRWNPKPE 60 QIRILEGIFN SGMVNPPRDE IRKIRTQLQE YGQVGDANVF YWFQNRKSRS KHKNRQVPKS 120 QQNQSNQPAA GRTTTNPSIP ATTTPANSSS IKTSSSDKSS PKLINSSKNS TSPAGFSLGS 180 CSSNLLDQLA YSPATSVNQN YDQLVQHDQP FMFPLQHLNF TAQGFPGFPD HQQIMMANRN 240 NNNLINNNVP HSVGPCTEFL FSELISSQHG VGSDPKKDAE DEEKLMIMKL GFSTAPSAAS 300 TVGNNLPLSA SNVMTLPSTL NQLQGAGEYS GPVAVGPIKL TVFINDVAFE VNCGPFHVRE 360 AFGDDAVLLH STGQPVLTNE WGVTLQPLQH GAFYYLI*

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MASSNRHWPS MFKSKPCNPH QQWPHEFSSS LLTGCHINPY TSGIEERSPE PKPRWNPKPE  60
QIRILEGIFN SGMVNPPRDE IRKIRTQLQE YGQVGDANVF YWFQNRKSRS KHKNRQVPKS  120
QQNQSNQPAA GRTTTNPSIP ATTTPANSSS IKTSSSDKSS PKLINSSKNS TSPAGFSLGS  180
CSSNLLDQLA YSPATSVNQN YDQLVQHDQP FMFPLQHLNF TAQGFPGFPD HQQIMMANRN  240
NNNLINNNVP HSVGPCTEFL FSELISSQHG VGSDPKKDAE DEEKLMIMKL GFSTAPSAAS  300
TVGNNLPLSA SNVMTLPSTL NQLQGAGEYS GPVAVGPIKL TVFINDVAFE VNCGPFHVRE  360
AFGDDAVLLH STGQPVLTNE WGVTLQPLQH GAFYYLI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-56	WOX family protein