PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0001s0259.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 317aa    MW: 34907.9 Da    PI: 8.1529
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0001s0259.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-10126172455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           h ++Er+RR+++ + +  L   lP +     kK +Ka++L  A++Y+k+Lq
  Kaladp0001s0259.1.p 126 DHIIAERKRREKLSQHIISLSASLPGL-----KKKDKASVLAGAIKYLKQLQ 172
                          699***********************9.....89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEDQSFINQW MTNSHEDLSA VMLPMAAATF SDSDLQHSML YDYQQPPTKL LETTSWGSSA  60
PDLQTRNYHP ATDVSAAAAA SFLYPANPPQ FPIGTQITDH HHQGEKGKVS ITSDAATTRI  120
SSGAQDHIIA ERKRREKLSQ HIISLSASLP GLKKKDKASV LAGAIKYLKQ LQERVKILEE  180
QTKLNKTAQS VVVLGKAGLV VDDDSHKPLS GEMFMKGTST EEQLPEIEAR VCERNVLIRI  240
HCDRKKCVLE KTLSEMVKLR LTLVSSSVIT FGCSALDITI TAQVDFRFRS KARSTLINPA  300
YLRICCTHIV ESQASG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131136ERKRRE
2132137RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-41bHLH family protein