PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0001s0172.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 323aa    MW: 34897.1 Da    PI: 8
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0001s0172.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.53.2e-29158216158
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                          ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +C+vkkkv+rsaed+++++ tY geHnh
  Kaladp0001s0172.1.p 158 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCQVKKKVQRSAEDQTMLVATYDGEHNH 216
                          58***************************99**************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEPSAWIDSS LSLALNLNPH YHPHPHPHPA PPPKPQIKEA EELAEELSRV IGENRKLTEM  60
LAAMYESYTA LQTQFEDLMR RTSAGSAKRK SPESGGDGVQ TDQSSSSSDD ESNVFKKPRE  120
SCSGGNCGGG AVAAGLMSRK PSSRVLVRID KSDTSLIVKD GYQWRKYGQK VTRDNPSPRA  180
YFKCSFAPSC QVKKKVQRSA EDQTMLVATY DGEHNHLPPS ETELPPHRSP VTTTNSVASS  240
AIGSSKPTVT LDLIQPVEEA RLDRAGSGAA EGQDSRPVFQ RFIVEQMASS LTNDPGFKAA  300
VAAVISGRMM DGNKGGMLGK WL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.26e-62WRKY family protein