PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019200555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YB | ||||||||
Protein Properties | Length: 250aa MW: 28556.6 Da PI: 6.9998 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 179.9 | 2.2e-56 | 33 | 128 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdrflPianv+rimkk++P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd+lwa++tlGfedyv+plk+yl+kyrelege XP_019200555.1 33 KEQDRFLPIANVGRIMKKAIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDILWAITTLGFEDYVNPLKLYLNKYRELEGE 127 89*******************************************************************************************99 PP NF-YB 97 k 97 k XP_019200555.1 128 K 128 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MEDDERHGNA PNVGLRASPE SSTCSKNNNN NNKEQDRFLP IANVGRIMKK AIPGNGKISK 60 DAKETVQECV SEFISFVTGE ASDKCQREKR KTINGDDILW AITTLGFEDY VNPLKLYLNK 120 YRELEGEKLN VPKQQQQQQH HQQQQNVVVD HQNSLNLAAV YNACSSNVYT SSNNSPAGLL 180 SHHPPYVSSS DHHLQPFLNL PFPTHQNTIQ AQFTQQEHIT FQKQERITFQ KQEHITFQKQ 240 EHIDSVGHWQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G13570.1 | 3e-65 | NF-YB family protein |