PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019200440.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 298aa MW: 34482 Da PI: 7.0971

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019200440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.9	7e-52	19	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeelvv+yL++k++++++++ +i+e+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk+v + XP_019200440.1 19 MPPGFRFHPTDEELVVHYLCRKCASQSISV-PIIAEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPVGK- 111 79**************************.88***********6666689*********************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ g+kk Lvfy g+apkg+kt+W+mheyrl XP_019200440.1 112 -PRTLGIKKALVFYAGKAPKGVKTNWIMHEYRL 143 .7789************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MKNNGGILNN NEQQQQLEMP PGFRFHPTDE ELVVHYLCRK CASQSISVPI IAEIDLYKFD 60 PWQLPDMALY GEKEWYFFSP RDRKYPNGSR PNRSAGTGYW KATGADKPVG KPRTLGIKKA 120 LVFYAGKAPK GVKTNWIMHE YRLANVDRSA GKKNNLRLDD WVLCRIYNKK GSVEKYYNVD 180 QNDVVLPKLE DQKPNITQFS QSATMLTQAA LPPVVQNQHD YVHFDTSESV LRWHTDSSCC 240 SEQVLSSPEF AADKEVQSAP KWDDLNFQLN NFIDDPFQMP QYNDPFQQDM FMYMQKPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-123	NAC family protein