PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019200219.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 359aa MW: 40904.6 Da PI: 6.659 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.1 | 1.2e-55 | 8 | 137 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ ++ + e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_019200219.1 8 VPPGFRFHPTDEELVDYYLRKKISSRRIDL-DVIKDVDLYKIEPWDLQElcRIGTeEQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 101 69****************************.9***************954555542556************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_019200219.1 102 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 137 **.8899****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MMNSFAHVPP GFRFHPTDEE LVDYYLRKKI SSRRIDLDVI KDVDLYKIEP WDLQELCRIG 60 TEEQNDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKA IYSKHDLIGM RKTLVFYKGR 120 APNGQKSDWI MHEYRLESDP NGTPQEEGWV VCRVFKKRIS TMRRESDHDS PIWYDDQVSF 180 MPEMDSPTQQ HPHQSGGRST YATQFPYRCK KELDLQYPPA VNAADHPQFL QLPLLESPNK 240 LLHAPPGLTY APIPAFVGGG GGHNIHPMYV DNNNNNILGG HEPAAAAAYH VTDWRVLDKF 300 VASQLSQEEA SKGPTTDDYA NAAGNIFQTS DDLNKQDPAP ENASTSSSTS HHHQIDLWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-125 | NAC family protein |