PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019200218.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 360aa MW: 41032.7 Da PI: 6.659

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019200218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.1	1.2e-55	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ ++ + e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_019200218.1 8 VPPGFRFHPTDEELVDYYLRKKISSRRIDL-DVIKDVDLYKIEPWDLQElcRIGTeEQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 101 69**************************.9***********954555542556******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_019200218.1 102 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 137 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MMNSFAHVPP GFRFHPTDEE LVDYYLRKKI SSRRIDLDVI KDVDLYKIEP WDLQELCRIG 60 TEEQNDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKA IYSKHDLIGM RKTLVFYKGR 120 APNGQKSDWI MHEYRLESDP NGTPQQEEGW VVCRVFKKRI STMRRESDHD SPIWYDDQVS 180 FMPEMDSPTQ QHPHQSGGRS TYATQFPYRC KKELDLQYPP AVNAADHPQF LQLPLLESPN 240 KLLHAPPGLT YAPIPAFVGG GGGHNIHPMY VDNNNNNILG GHEPAAAAAY HVTDWRVLDK 300 FVASQLSQEE ASKGPTTDDY ANAAGNIFQT SDDLNKQDPA PENASTSSST SHHHQIDLWK

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MMNSFAHVPP GFRFHPTDEE LVDYYLRKKI SSRRIDLDVI KDVDLYKIEP WDLQELCRIG  60
TEEQNDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKA IYSKHDLIGM RKTLVFYKGR  120
APNGQKSDWI MHEYRLESDP NGTPQQEEGW VVCRVFKKRI STMRRESDHD SPIWYDDQVS  180
FMPEMDSPTQ QHPHQSGGRS TYATQFPYRC KKELDLQYPP AVNAADHPQF LQLPLLESPN  240
KLLHAPPGLT YAPIPAFVGG GGGHNIHPMY VDNNNNNILG GHEPAAAAAY HVTDWRVLDK  300
FVASQLSQEE ASKGPTTDDY ANAAGNIFQT SDDLNKQDPA PENASTSSST SHHHQIDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-123	NAC family protein