PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019200217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 360aa MW: 41032.7 Da PI: 6.659 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.1 | 1.2e-55 | 8 | 137 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ ++ + e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_019200217.1 8 VPPGFRFHPTDEELVDYYLRKKISSRRIDL-DVIKDVDLYKIEPWDLQElcRIGTeEQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 101 69****************************.9***************954555542556************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_019200217.1 102 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 137 **.8899****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence |
MMNSFAHVPP GFRFHPTDEE LVDYYLRKKI SSRRIDLDVI KDVDLYKIEP WDLQELCRIG 60 TEEQNDWYFF SHKDKKYPTG TRTNRATAAG FWKATGRDKA IYSKHDLIGM RKTLVFYKGR 120 APNGQKSDWI MHEYRLESDP NGTPQQEEGW VVCRVFKKRI STMRRESDHD SPIWYDDQVS 180 FMPEMDSPTQ QHPHQSGGRS TYATQFPYRC KKELDLQYPP AVNAADHPQF LQLPLLESPN 240 KLLHAPPGLT YAPIPAFVGG GGGHNIHPMY VDNNNNNILG GHEPAAAAAY HVTDWRVLDK 300 FVASQLSQEE ASKGPTTDDY ANAAGNIFQT SDDLNKQDPA PENASTSSST SHHHQIDLWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-123 | NAC family protein |