PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019199885.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28081.9 Da PI: 9.0814 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_019199885.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 100.2 | 2.8e-33 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++++++ ++e+ +Lk+++e Lqr+qR+llGedL++Ls keL+qLe+qLe slk+iRs+K++ +l+q+ elq++e++l e nk Lr+klee XP_019199885.1 82 QPASDTQNNYHEYLRLKARVELLQRSQRNLLGEDLGPLSTKELEQLENQLEASLKQIRSRKTQSMLDQLAELQQREQMLAESNKLLRRKLEE 173 567889***********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SSMMKTLERY QRCSYAHLEA NQPASDTQNN YHEYLRLKAR VELLQRSQRN LLGEDLGPLS 120 TKELEQLENQ LEASLKQIRS RKTQSMLDQL AELQQREQML AESNKLLRRK LEENVAGIPL 180 RLSWEDGNQE IHQQNRQLPP QSEGFFQPLG LNISGQIGYN SVGTDEVNVA ASAHNISGFF 240 PGWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 4e-99 | MIKC_MADS family protein |