PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019199819.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family SBP
Protein Properties Length: 466aa    MW: 51098.5 Da    PI: 8.4085
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019199819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP131.43.2e-41173250178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +CqvegC++dls+akeyhr+h+vCe hsk p+v+v gle+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+++
  XP_019199819.1 173 RCQVEGCNVDLSSAKEYHRKHRVCESHSKYPKVIVGGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPHQ 250
                     6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MEWNAKWDWE SLAMYSSKAC ENPKKLQLTD WGIVEEGELG DGSFNLSGGG GGYGSDVGQG  60
SSAKSTISAS TNSSPKDGMK DSNFTFEGGY PGDFGKKPKQ CRPEVSENSP PQDTSAGSVE  120
AWIGLKLGKR TYFENNNCAG NGTKDSSIST APMPSGPTAK TRKPSSQTAT IPRCQVEGCN  180
VDLSSAKEYH RKHRVCESHS KYPKVIVGGL ERRFCQQCSR FHSLSEFDEK KRSCRRRLSD  240
HNARRRKPHQ DTFQFNSARL SSSFYDGDRQ QINFVLNNAP LFHPKTAANL AWENAYPSKF  300
TITRGFSSEP EKTGSTNKQP YMSGIQPPSS ISKHGNTFLA SKGTTPESFT QGVKESVFPS  360
NTSTTQEFPR ALSLLSTSSW GSCEHNSTSL DHHHPTHANQ NGLPEPVMHA LPLGLPLPPS  420
EYLQAEQHPA ANFRGHFLAS NTNSGGTHLL DVPLLKDSDF YLNAFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230247KKRSCRRRLSDHNARRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.19e-65SBP family protein