PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019199819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SBP | ||||||||
Protein Properties | Length: 466aa MW: 51098.5 Da PI: 8.4085 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.4 | 3.2e-41 | 173 | 250 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++dls+akeyhr+h+vCe hsk p+v+v gle+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+++ XP_019199819.1 173 RCQVEGCNVDLSSAKEYHRKHRVCESHSKYPKVIVGGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPHQ 250 6**************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence |
MEWNAKWDWE SLAMYSSKAC ENPKKLQLTD WGIVEEGELG DGSFNLSGGG GGYGSDVGQG 60 SSAKSTISAS TNSSPKDGMK DSNFTFEGGY PGDFGKKPKQ CRPEVSENSP PQDTSAGSVE 120 AWIGLKLGKR TYFENNNCAG NGTKDSSIST APMPSGPTAK TRKPSSQTAT IPRCQVEGCN 180 VDLSSAKEYH RKHRVCESHS KYPKVIVGGL ERRFCQQCSR FHSLSEFDEK KRSCRRRLSD 240 HNARRRKPHQ DTFQFNSARL SSSFYDGDRQ QINFVLNNAP LFHPKTAANL AWENAYPSKF 300 TITRGFSSEP EKTGSTNKQP YMSGIQPPSS ISKHGNTFLA SKGTTPESFT QGVKESVFPS 360 NTSTTQEFPR ALSLLSTSSW GSCEHNSTSL DHHHPTHANQ NGLPEPVMHA LPLGLPLPPS 420 EYLQAEQHPA ANFRGHFLAS NTNSGGTHLL DVPLLKDSDF YLNAFN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 230 | 247 | KKRSCRRRLSDHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 9e-65 | SBP family protein |