PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019199478.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 247aa MW: 26375.2 Da PI: 6.827 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00037 | 74 | 96 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++sF++ L H +H XP_019199478.1 74 YECKTCNRSFPSFQALGGHRASH 96 99**********99999998887 PP | |||||||
2 | zf-C2H2 | 11.5 | 0.00091 | 141 | 163 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C Fs+ L H+r+H XP_019199478.1 141 HECSICRAEFSSGQALGGHMRRH 163 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MATMEFSQEI SYVHHSPTYS TEEDEDMAAN CLILLAQGGC RVKQVAAAAG KISSRKFSEM 60 ATGGGKAAAG LYVYECKTCN RSFPSFQALG GHRASHKKPK LMDHHEHHHQ DHYDQQSPPP 120 PQPQPPLSAA HGGSSKLAKI HECSICRAEF SSGQALGGHM RRHRPAAPIN TAAAAKGGSV 180 SSSNDEEATE SSDGVGGNPR AAVFSLDLNL PAPQEEEEGG HGNKFEFSAK QQQSLVFSVP 240 ALVDCHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04390.1 | 1e-44 | C2H2 family protein |