PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019198850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | AP2 | ||||||||
Protein Properties | Length: 465aa MW: 51238.1 Da PI: 8.9492 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.1e-17 | 168 | 217 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_019198850.1 168 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 217 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence |
MHAHTRKQRD MLLEDLNVDA VFYMDSACDE SDPDPCGRVT ASLNGGDDSG TSNTASSSSV 60 VNADDPPSSP STLAFSILKT SQVIEVEDGR NEAASVVASR QLLPVTREPF FSSAWPPPPQ 120 QQQQHQNWLK LSAPETGRGA EVGTFEPPYP QPCQPIKKSR RGPRSRSSQY RGVTFYRRTG 180 RWESHIWDCG KQVYLGGFDT AHSAARAYDR AAIKFRGVDA DINFHLSDYE EDMKQMKNLN 240 KEEFVQILRR QSTGFSRGSS KYRGVTLHKC GRWEARMGQL AGKKAYDKAA IKCYGREAMT 300 NFEPSAYEGE MNKNTRDGGT NASLDLNLWI SPPLDGPKRP ENARKLQFNF EARDLSLLKR 360 VKVECTPGTP YGPAMASQYS RWPGLQSALT PNNEEGLMGT NAEASSPVFS NLRWLSQGVA 420 PSAPRFSSAA SSGFSSTATS MFKFPSAAPP PSAASQNHLM TLRPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 4e-86 | AP2 family protein |