PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019198301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YC | ||||||||
Protein Properties | Length: 235aa MW: 26452.9 Da PI: 5.9293 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 177.5 | 1.3e-55 | 58 | 161 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlr+w+h+eenkrrtl+k+diaaa+trtdifdfl XP_019198301.1 58 QLQAFWANQyqeIEQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFDFL 152 89******9999*********************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_019198301.1 153 VDIVPREDL 161 ******987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDQHGNGQPP PGPPPATSVG PIQSPQNVGL PASSSQMAQH QLAYQHIHQQ QQQQLQQQLQ 60 AFWANQYQEI EQVTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVVFARA CEMFILELTL 120 RAWNHTEENK RRTLQKNDIA AAITRTDIFD FLVDIVPRED LKDEVLASIP RGTLPVGGPA 180 ELPYYYMQAQ SAPQVGTSGM YMGKPVDQTP YGQQPRPYMA QPMWPQQQQQ PPSDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 131 | 137 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 2e-85 | NF-YC family protein |