PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019198049.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 582aa MW: 63004.6 Da PI: 6.8935

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019198049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.8	1.5e-30	220	279	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_019198049.1 220 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApNCPVRKQVQRCADDMSILITTYEGTHNHP 279 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MEEDKKKAAD SSGDHEIGDG NKEKERGTLK SSSSPNHKNL SSDKEENELL ESAKAEMGEV 60 MEENQRLKMY LERMMNDYRT LQMQFQGMVE KEEGEKAAKS ENDNNTPQVT EESDQLVSLS 120 LGRASAEMKR SIMCGAGKDN EENDEKEGLT LGLDCKFKSL QPNNQSTDNS SDEVKEENGE 180 TWPPSKALKT TRSGEDEVSQ QNPAKRARVS VRVRCDAPTM NDGCQWRKYG QKIAKGNPCP 240 RAYYRCTVAP NCPVRKQVQR CADDMSILIT TYEGTHNHPL PLSATAIAST TSAAASMLMS 300 GSSTSASTSM PPGTTTATTT STANLNGLNF YLSDASKPKP FYIPTSSIAP TLGHPTIVLD 360 LTSSAPSSTS SNLSRIGSLG NYPPRFSSTN LNFSSLESNP LPISWNLGTT QPYNKPHISS 420 SLSFARQQQQ HQQQPFHQDN QILFQSYLSK NNLNNNNTPS QSLPQETIAA ATKAITSDPN 480 FQSALAAALS SIIGTNNGNS GTSLNNLGIH GLAEKLSQNL KAAAEPFPIL SSFSPSPNPN 540 KCSSSLLSRP TTTSSANPHP GNLMYHLQQT SKSKSSSPGD SR

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MEEDKKKAAD SSGDHEIGDG NKEKERGTLK SSSSPNHKNL SSDKEENELL ESAKAEMGEV  60
MEENQRLKMY LERMMNDYRT LQMQFQGMVE KEEGEKAAKS ENDNNTPQVT EESDQLVSLS  120
LGRASAEMKR SIMCGAGKDN EENDEKEGLT LGLDCKFKSL QPNNQSTDNS SDEVKEENGE  180
TWPPSKALKT TRSGEDEVSQ QNPAKRARVS VRVRCDAPTM NDGCQWRKYG QKIAKGNPCP  240
RAYYRCTVAP NCPVRKQVQR CADDMSILIT TYEGTHNHPL PLSATAIAST TSAAASMLMS  300
GSSTSASTSM PPGTTTATTT STANLNGLNF YLSDASKPKP FYIPTSSIAP TLGHPTIVLD  360
LTSSAPSSTS SNLSRIGSLG NYPPRFSSTN LNFSSLESNP LPISWNLGTT QPYNKPHISS  420
SLSFARQQQQ HQQQPFHQDN QILFQSYLSK NNLNNNNTPS QSLPQETIAA ATKAITSDPN  480
FQSALAAALS SIIGTNNGNS GTSLNNLGIH GLAEKLSQNL KAAAEPFPIL SSFSPSPNPN  540
KCSSSLLSRP TTTSSANPHP GNLMYHLQQT SKSKSSSPGD SR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	7e-62	WRKY family protein