PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019197883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 258aa MW: 28890.5 Da PI: 4.5694 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.4 | 2.6e-13 | 53 | 95 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+RR+++N++++ Lr ++Pk + K++Ka+i + A+eYI++L XP_019197883.1 53 VSERNRRKKLNERLFALRAVVPKiS------KMDKASIIKDAIEYIQEL 95 57*********************66......****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MENIGDEYKH YWETQTFLQS EELDSYFEEA ISAYYDSSSP DGSQSSAASK NIVSERNRRK 60 KLNERLFALR AVVPKISKMD KASIIKDAIE YIQELREQER IIQAEIWELE SGNGGARSKN 120 NNGIFEFDQE GISSNSKPKR TRLVDDQLPA PGAGGYDESP PPGSTSPVDV LELRVSSMGK 180 KTVVVSLTCS KRTDTMMKLC EIFESLDIKI ISANITAFSG RLLKTVFIEA EEEEKDLLKI 240 RIETAIATLN DPDSPMGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 7e-74 | bHLH family protein |