PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019196829.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 493aa MW: 53487.9 Da PI: 9.3179 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.2 | 1.4e-05 | 94 | 116 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_019196829.1 94 FVCEICNKGFQRDQNLQLHRRGH 116 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.8 | 0.00036 | 171 | 193 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_019196829.1 171 WKCDKCSKRYAVQSDWKAHSKTC 193 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 493 aa Download sequence |
MMMKGVMIHQ PNLDNQENMS NVTSAASGEA SVSSSNGGVY PHQQHYFGGN TINQPQPQPQ 60 PQQIKKKRNQ PGNPDPDSEV IALSPKTLMA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW 120 KLKQRSSKDV VRKKVYVCPE TNCVHHDPSR ALGDLTGIKK HFCRKHGEKK WKCDKCSKRY 180 AVQSDWKAHS KTCGTREYRC DCGTLFSRRD SFITHRAFCD ALAEESARAI TGNNNNNNNA 240 FHHHHLNSQP RSSSAPLSNN ISLHFQPPQF TADFSAVKKE QTNTAAAGGF NLRPEIPPWL 300 LPGGGSPHPQ PQPPPPPPPI DMTHSIFQEF GGGGLPGFHS AVGSPHISAT ALLQKAVVMS 360 GPHLAHVSSD QPDFGLNLSS RGAGGLLDGL ASFGGKATVS AAAPSASAAP SASFLHDMMN 420 SFSSNNPPFE DPLFGSFFNN KKDAGAGAGV VNDDITKDFL GLRPLSRTDI FNITGGLVNS 480 PADQSQKTWQ QSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 134 | KLKQRSSKDVVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13810.1 | 1e-114 | C2H2 family protein |